Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899995.1_cds_XP_016450032.1_44522
CDS Infomation

[gene=LOC107774890] [db_xref=GeneID:107774890] [protein=serine/threonine-protein kinase PEPKR2-like] [protein_id=XP_016450032.1] [location=complement(join(13064..13392,15211..15507,16287..17028))] [gbkey=CDS]
Sequence

ATGGAGAACTTGGGTAAGAAGAGAAAGGGAGTAGATATTTCAGTTACTTGTCAAAAAGAT
GTGAGTCCTTTCACAGTAGTCAGGTCACATTTATCACTTGAGGATTACTCGCGAAGGAAA
AAGAAATCTAGGGAAATTGTGGTTGAAGATGCTAACTGTTGTAGGAAGAGTGTAATCACA
GGAGTAGTCACTGCCCCGCCTTGTGGGAGTGCACGTTCACGCTCACCTGGACGAGGACTT
AAAAGGAAAATAGGTTGCCTTGATTCAGCCACGCGATTGGGGAGGAAGAAGAAGATTGAG
CAGGATTATGAGATGGGAGAAGTTATTGGGAAAGGGAAATTTGGGTCTGTATTATTATGT
CGTAGGAAGTTGAGTGGAGAAAAGCATGCTTGCAAGACTCTGCGTAAGGGGGAAGAGATC
ATTCACCGTGAAGTGGAGATAATGCAGCATCTCTCTGGGCATCCAGGTGTTGTGACACTG
AAGGCTGTTTATGAGGATGCTGAATCTTTTTATCTTGTTATGGAACTTTGCTCAGGCGGA
AGGTTGCTTGACCAAATGGCTAGGGTAGGGAGATATCCGGAGCAACAAGCTGCTAATGTG
ATCAAAGATCTGATGCTGGTTATTAGATACTGTCATGAGATGGGTGTTGTGCACAGGGAC
ATTAAGCCCGAAAATGTCCTCCTTACAACCTCTGGACAAGTTAAGGTTTCAGACTTTGGG
CTAGCTATGAGAATTTCAGATGGTCAGAGTTTGACTGGTGTGGTCGGAAGTCCAGCTTAT
GTTGCTCCTGAGGTTCTGCTTGGTGATTACACTGAGAAAGTGGACGTATGGAGTGTCGGT
GTCCTCCTGCATGCACTTTTGATGGGCGGGCTCCCATTTCAAGGTGATTCTTTGGAATCT
ATATTCAGCGCAATTAAGGAGGAGAATCTTGAGTTCACTGGTGGACCCTGGGAATTTGTG
TCACAACCTGCTCGTGATTTGCTTTCCCGTATGATGACAAGGGATGTTTCAGCAAGGTAC
AGTGCCGATGAAGTACTAAGGCATCCATGGATTTTATTTTACACAGAACCCACATTGAAG
AACCATGTAAAACCAATCAAAAGCAAGCTGACTGCTACTACTAGGATAGAACGGGAGAGA
AGAAACTTAGCCTTTAGCTCTCTCAGTGATGATTTTGGTTCAACTTTTGGTAGTTCGTCT
AATATGCCTGAAGGTGAAGACTCTGGTTTTATCGATGCTCTCACAGTGGCCGTTTCACAT
ATGAAGATATCAGAGCCAAAGAGAAGTAGAATATGCAGCCCAGCCAGAACAATTGATCAA
GACTGTCCCCCTAACATACAAGCTAACCACCTCTGTACAGCATTTTGA

Peptide Sequence

PEP ID

XP_016450032.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase PEPKR2-like [Nicotiana tabacum]
Sequence

MENLGKKRKGVDISVTCQKDVSPFTVVRSHLSLEDYSRRKKKSREIVVEDANCCRKSVIT
GVVTAPPCGSARSRSPGRGLKRKIGCLDSATRLGRKKKIEQDYEMGEVIGKGKFGSVLLC
RRKLSGEKHACKTLRKGEEIIHREVEIMQHLSGHPGVVTLKAVYEDAESFYLVMELCSGG
RLLDQMARVGRYPEQQAANVIKDLMLVIRYCHEMGVVHRDIKPENVLLTTSGQVKVSDFG
LAMRISDGQSLTGVVGSPAYVAPEVLLGDYTEKVDVWSVGVLLHALLMGGLPFQGDSLES
IFSAIKEENLEFTGGPWEFVSQPARDLLSRMMTRDVSARYSADEVLRHPWILFYTEPTLK
NHVKPIKSKLTATTRIERERRNLAFSSLSDDFGSTFGSSSNMPEGEDSGFIDALTVAVSH
MKISEPKRSRICSPARTIDQDCPPNIQANHLCTAF

Transcript Sequence

Gene sequence data has not been registered.